Systems Biology

  1. Synthetic Biology
    1. Design Principles
      1. Modularity and Standardization
        1. BioBrick Standards
          1. Modular Design
            1. Interchangeable Parts
            2. Abstraction Hierarchy
              1. Parts Level
                1. Device Level
                  1. System Level
                  2. Predictable Design
                    1. Forward Engineering
                      1. Design-Build-Test-Learn Cycles
                        1. Standardized Characterization
                      2. Biological Circuit Design
                        1. Genetic Switches
                          1. Toggle Switches
                            1. Bistable Systems
                              1. Memory Devices
                              2. Oscillators
                                1. Repressilator
                                  1. Relaxation Oscillators
                                    1. Coupled Oscillators
                                    2. Logic Gates
                                      1. AND Gates
                                        1. OR Gates
                                          1. NOT Gates
                                            1. Complex Logic Functions
                                          2. Metabolic Engineering
                                            1. Pathway Design
                                              1. Heterologous Pathways
                                                1. Pathway Optimization
                                                  1. Flux Redirection
                                                  2. Host Engineering
                                                    1. Chassis Organisms
                                                      1. Metabolic Burden
                                                        1. Strain Optimization
                                                        2. Bioproduction Systems
                                                          1. Biofuels
                                                            1. Pharmaceuticals
                                                              1. Chemicals
                                                            2. Computational Tools
                                                              1. Design Software
                                                                1. Circuit Design Tools
                                                                  1. Pathway Design Tools
                                                                    1. Optimization Algorithms
                                                                    2. Modeling and Simulation
                                                                      1. Deterministic Models
                                                                        1. Stochastic Models
                                                                          1. Multiscale Models
                                                                          2. Experimental Automation
                                                                            1. High-Throughput Screening
                                                                              1. Automated Assembly
                                                                                1. Robotic Systems

                                                                            Previous

                                                                            11. Drug Discovery and Development

                                                                            Go to top

                                                                            Next

                                                                            13. Emerging Technologies and Future Directions