Genomics

  1. Applications of Genomics
    1. Medical and Clinical Genomics
      1. Genetic Disease Analysis
        1. Mendelian Disorders
          1. Single Gene Disorders
            1. Mutation Detection Methods
              1. Genetic Counseling
              2. Complex Genetic Diseases
                1. Polygenic Risk Scores
                  1. Gene-Environment Interactions
                    1. Heritability Estimation
                  2. Genome-Wide Association Studies (GWAS)
                    1. Study Design and Power
                      1. Population Stratification
                        1. Statistical Analysis Methods
                          1. Post-GWAS Analysis
                            1. Fine Mapping
                              1. Functional Follow-Up
                            2. Cancer Genomics
                              1. Somatic Mutation Analysis
                                1. Driver vs. Passenger Mutations
                                  1. Mutational Signatures
                                    1. Clonal Evolution
                                    2. Tumor Profiling
                                      1. Whole-Genome Sequencing
                                        1. Targeted Sequencing Panels
                                          1. Liquid Biopsies
                                          2. Therapeutic Applications
                                            1. Targeted Therapies
                                              1. Immunotherapy
                                                1. Drug Resistance
                                              2. Pharmacogenomics
                                                1. Drug Metabolism Genetics
                                                  1. Adverse Drug Reaction Prediction
                                                    1. Dosing Optimization
                                                      1. Clinical Implementation
                                                      2. Precision Medicine
                                                        1. Genomic Biomarkers
                                                          1. Treatment Selection
                                                            1. Risk Stratification
                                                              1. Clinical Decision Support
                                                              2. Clinical Genetic Testing
                                                                1. Diagnostic Testing
                                                                  1. Predictive Testing
                                                                    1. Carrier Screening
                                                                      1. Prenatal and Newborn Screening
                                                                        1. Direct-to-Consumer Testing
                                                                      2. Agricultural Genomics
                                                                        1. Crop Genomics
                                                                          1. Genome Sequencing Projects
                                                                            1. Trait Mapping
                                                                              1. Quantitative Trait Loci (QTL)
                                                                                1. Genome-Wide Association Studies
                                                                                2. Marker-Assisted Selection
                                                                                  1. Genomic Selection
                                                                                    1. Gene Editing Applications
                                                                                    2. Livestock Genomics
                                                                                      1. Animal Breeding Programs
                                                                                        1. Genomic Selection Implementation
                                                                                          1. Disease Resistance
                                                                                            1. Production Traits
                                                                                            2. Plant Breeding Applications
                                                                                              1. Yield Improvement
                                                                                                1. Stress Tolerance
                                                                                                  1. Nutritional Enhancement
                                                                                                    1. Disease and Pest Resistance
                                                                                                  2. Microbial and Environmental Genomics
                                                                                                    1. Pathogen Genomics
                                                                                                      1. Outbreak Investigation
                                                                                                        1. Antimicrobial Resistance
                                                                                                          1. Virulence Factor Analysis
                                                                                                            1. Vaccine Development
                                                                                                            2. Metagenomics
                                                                                                              1. Environmental Metagenomics
                                                                                                                1. Human Microbiome Analysis
                                                                                                                  1. Functional Metagenomics
                                                                                                                    1. Metatranscriptomics
                                                                                                                    2. Environmental DNA (eDNA)
                                                                                                                      1. Biodiversity Assessment
                                                                                                                        1. Species Detection
                                                                                                                          1. Ecosystem Monitoring
                                                                                                                            1. Conservation Applications
                                                                                                                          2. Conservation Genomics
                                                                                                                            1. Population Genetics Analysis
                                                                                                                              1. Genetic Diversity Assessment
                                                                                                                                1. Population Structure
                                                                                                                                  1. Gene Flow Analysis
                                                                                                                                    1. Effective Population Size
                                                                                                                                    2. Conservation Applications
                                                                                                                                      1. Endangered Species Management
                                                                                                                                        1. Captive Breeding Programs
                                                                                                                                          1. Habitat Connectivity
                                                                                                                                            1. Climate Change Adaptation
                                                                                                                                            2. Wildlife Forensics
                                                                                                                                              1. Species Identification
                                                                                                                                                1. Individual Identification
                                                                                                                                                  1. Trade Route Analysis
                                                                                                                                                    1. DNA Barcoding

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                                                                                                                                                5. Comparative and Evolutionary Genomics

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                                                                                                                                                7. Ethical, Legal, and Social Implications (ELSI) of Genomics