Useful Links
1. Introduction to Computational Chemistry
2. Mathematical and Physical Foundations
3. Potential Energy Surfaces
4. Molecular Mechanics Methods
5. Quantum Mechanical Methods
6. Molecular Dynamics Simulations
7. Monte Carlo Methods
8. Energy Minimization and Optimization
9. Hybrid and Multiscale Methods
10. Property Calculations
11. Solvation and Environmental Effects
12. Free Energy Methods
13. Excited States and Photochemistry
14. Solid State and Materials
15. Computational Tools and Software
16. High-Performance Computing
17. Best Practices and Validation
  1. Chemistry
  2. Specialized Chemistry

Computational Chemistry

1. Introduction to Computational Chemistry
2. Mathematical and Physical Foundations
3. Potential Energy Surfaces
4. Molecular Mechanics Methods
5. Quantum Mechanical Methods
6. Molecular Dynamics Simulations
7. Monte Carlo Methods
8. Energy Minimization and Optimization
9. Hybrid and Multiscale Methods
10. Property Calculations
11. Solvation and Environmental Effects
12. Free Energy Methods
13. Excited States and Photochemistry
14. Solid State and Materials
15. Computational Tools and Software
16. High-Performance Computing
17. Best Practices and Validation
  1. Computational Tools and Software
    1. Quantum Chemistry Packages
      1. Gaussian
        1. ORCA
          1. Q-Chem
            1. NWChem
              1. Psi4
                1. GAMESS
                2. Molecular Dynamics Software
                  1. GROMACS
                    1. AMBER
                      1. CHARMM
                        1. NAMD
                          1. LAMMPS
                            1. OpenMM
                            2. Visualization Tools
                              1. VMD
                                1. PyMOL
                                  1. ChimeraX
                                    1. Avogadro
                                      1. GaussView
                                        1. Molden
                                        2. Analysis Software
                                          1. MDAnalysis
                                            1. MDTraj
                                              1. CPPTRAJ
                                                1. VMD Plugins
                                                2. Workflow Management
                                                  1. Input File Preparation
                                                    1. Job Submission Systems
                                                      1. Output Processing
                                                        1. Data Management

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